STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNAN_2444Hypothetical protein. (409 aa)    
Predicted Functional Partners:
RNAN_2445
Hypothetical protein.
       0.787
RNAN_2446
Hypothetical protein.
       0.777
blc
Outer membrane lipoprotein Blc; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
       0.636
pheA
Chorismate mutase.
     
 0.578
RNAN_2443
LysR substrate binding domain protein; Belongs to the LysR transcriptional regulatory family.
       0.520
RNAN_3672
TonB-dependent receptor.
  
     0.513
tyrA
Chorismate mutase.
    
  0.481
RNAN_0606
Membrane-fusion protein.
 
   0.461
kefA
Potassium efflux system protein KefA.
       0.449
RNAN_0402
Hypothetical protein.
  
     0.430
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.