STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNAN_2470Amino acid ABC transporter/signal transduction system protein. (257 aa)    
Predicted Functional Partners:
RNAN_0281
Hypothetical protein.
   
 0.791
RNAN_3236
Hypothetical protein.
  
     0.752
RNAN_0520
Hypothetical protein.
  
     0.744
RNAN_1468
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
     0.743
arcB
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
   
 0.715
RNAN_2442
Hypothetical protein.
  
     0.711
RNAN_2125
Hypothetical protein.
 
  
 0.685
RNAN_1147
Polar amino acid transport system substrate-binding protein.
  
     0.660
RNAN_1918
Hypothetical protein.
  
     0.657
RNAN_0083
Hypothetical protein.
 
  
 0.654
Your Current Organism:
Rheinheimera nanhaiensis
NCBI taxonomy Id: 562729
Other names: R. nanhaiensis E407-8, Rheinheimera nanhaiensis E407-8, Rheinheimera nanhaiensis str. E407-8, Rheinheimera nanhaiensis strain E407-8, Rheinheimera sp. E407-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.