Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RNAN_0597 | RNAN_2750 | RNAN_0597 | RNAN_2750 | Hypothetical protein. | Hypothetical protein. | 0.758 |
RNAN_0597 | RNAN_2847 | RNAN_0597 | RNAN_2847 | Hypothetical protein. | Hypothetical protein. | 0.771 |
RNAN_0597 | RNAN_3279 | RNAN_0597 | RNAN_3279 | Hypothetical protein. | Hypothetical protein. | 0.769 |
RNAN_1859 | RNAN_2750 | RNAN_1859 | RNAN_2750 | Hypothetical protein. | Hypothetical protein. | 0.768 |
RNAN_1859 | RNAN_2847 | RNAN_1859 | RNAN_2847 | Hypothetical protein. | Hypothetical protein. | 0.770 |
RNAN_1859 | RNAN_3279 | RNAN_1859 | RNAN_3279 | Hypothetical protein. | Hypothetical protein. | 0.771 |
RNAN_2750 | RNAN_0597 | RNAN_2750 | RNAN_0597 | Hypothetical protein. | Hypothetical protein. | 0.758 |
RNAN_2750 | RNAN_1859 | RNAN_2750 | RNAN_1859 | Hypothetical protein. | Hypothetical protein. | 0.768 |
RNAN_2750 | RNAN_2847 | RNAN_2750 | RNAN_2847 | Hypothetical protein. | Hypothetical protein. | 0.765 |
RNAN_2750 | RNAN_3279 | RNAN_2750 | RNAN_3279 | Hypothetical protein. | Hypothetical protein. | 0.769 |
RNAN_2750 | hemB | RNAN_2750 | RNAN_2747 | Hypothetical protein. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.799 |
RNAN_2750 | pleD-3 | RNAN_2750 | RNAN_2748 | Hypothetical protein. | Two-component system, cell cycle response regulator. | 0.783 |
RNAN_2750 | tatA | RNAN_2750 | RNAN_2753 | Hypothetical protein. | Sec-independent protein translocase protein tatA/E homolog; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.804 |
RNAN_2750 | tatB | RNAN_2750 | RNAN_2752 | Hypothetical protein. | Sec-independent protein translocase protein tatB homolog. | 0.804 |
RNAN_2750 | tatC | RNAN_2750 | RNAN_2751 | Hypothetical protein. | Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.805 |
RNAN_2750 | tatD | RNAN_2750 | RNAN_2749 | Hypothetical protein. | TatD DNase family protein. | 0.786 |
RNAN_2847 | RNAN_0597 | RNAN_2847 | RNAN_0597 | Hypothetical protein. | Hypothetical protein. | 0.771 |
RNAN_2847 | RNAN_1859 | RNAN_2847 | RNAN_1859 | Hypothetical protein. | Hypothetical protein. | 0.770 |
RNAN_2847 | RNAN_2750 | RNAN_2847 | RNAN_2750 | Hypothetical protein. | Hypothetical protein. | 0.765 |
RNAN_2847 | RNAN_3279 | RNAN_2847 | RNAN_3279 | Hypothetical protein. | Hypothetical protein. | 0.764 |
page 1 of 3