Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RNAN_2213 | RNAN_3067 | RNAN_2213 | RNAN_3067 | FAD linked oxidase-like protein. | Cytochrome c4. | 0.669 |
RNAN_2213 | RNAN_3367 | RNAN_2213 | RNAN_3367 | FAD linked oxidase-like protein. | D-lactate dehydrogenase, putative. | 0.889 |
RNAN_2213 | coxB | RNAN_2213 | RNAN_2510 | FAD linked oxidase-like protein. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.880 |
RNAN_2517 | RNAN_3067 | RNAN_2517 | RNAN_3067 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome c4. | 0.617 |
RNAN_2517 | RNAN_3651 | RNAN_2517 | RNAN_3651 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome c5. | 0.763 |
RNAN_2517 | ccoO | RNAN_2517 | RNAN_2061 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome c oxidase cbb3-type subunit II. | 0.487 |
RNAN_2517 | coxB | RNAN_2517 | RNAN_2510 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.972 |
RNAN_2517 | fixN | RNAN_2517 | RNAN_2062 | Cytochrome c oxidase assembly protein subunit 15. | Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family. | 0.525 |
RNAN_2517 | petA | RNAN_2517 | RNAN_1843 | Cytochrome c oxidase assembly protein subunit 15. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.441 |
RNAN_2517 | petB | RNAN_2517 | RNAN_1844 | Cytochrome c oxidase assembly protein subunit 15. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.427 |
RNAN_2517 | petC | RNAN_2517 | RNAN_1845 | Cytochrome c oxidase assembly protein subunit 15. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.851 |
RNAN_3067 | RNAN_2213 | RNAN_3067 | RNAN_2213 | Cytochrome c4. | FAD linked oxidase-like protein. | 0.669 |
RNAN_3067 | RNAN_2517 | RNAN_3067 | RNAN_2517 | Cytochrome c4. | Cytochrome c oxidase assembly protein subunit 15. | 0.617 |
RNAN_3067 | RNAN_3367 | RNAN_3067 | RNAN_3367 | Cytochrome c4. | D-lactate dehydrogenase, putative. | 0.669 |
RNAN_3067 | RNAN_3651 | RNAN_3067 | RNAN_3651 | Cytochrome c4. | Cytochrome c5. | 0.874 |
RNAN_3067 | ccoO | RNAN_3067 | RNAN_2061 | Cytochrome c4. | Cytochrome c oxidase cbb3-type subunit II. | 0.934 |
RNAN_3067 | coxB | RNAN_3067 | RNAN_2510 | Cytochrome c4. | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.862 |
RNAN_3067 | fixN | RNAN_3067 | RNAN_2062 | Cytochrome c4. | Cytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family. | 0.917 |
RNAN_3067 | petA | RNAN_3067 | RNAN_1843 | Cytochrome c4. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.862 |
RNAN_3067 | petB | RNAN_3067 | RNAN_1844 | Cytochrome c4. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.818 |
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