Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RNAN_0603 | RNAN_3756 | RNAN_0603 | RNAN_3756 | ABC transporter permease. | Hypothetical protein. | 0.609 |
| RNAN_0603 | lolD | RNAN_0603 | RNAN_3313 | ABC transporter permease. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.708 |
| RNAN_0857 | lolA | RNAN_0857 | RNAN_2792 | ABC-type antimicrobial peptide transport system. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.514 |
| RNAN_0857 | lolD | RNAN_0857 | RNAN_3313 | ABC-type antimicrobial peptide transport system. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.777 |
| RNAN_0954 | lolD | RNAN_0954 | RNAN_3313 | Hypothetical protein. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.647 |
| RNAN_3756 | RNAN_0603 | RNAN_3756 | RNAN_0603 | Hypothetical protein. | ABC transporter permease. | 0.609 |
| RNAN_3756 | RNAN_3757 | RNAN_3756 | RNAN_3757 | Hypothetical protein. | Peptide ABC transporter permease. | 0.979 |
| RNAN_3756 | lolD | RNAN_3756 | RNAN_3313 | Hypothetical protein. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.970 |
| RNAN_3757 | RNAN_3756 | RNAN_3757 | RNAN_3756 | Peptide ABC transporter permease. | Hypothetical protein. | 0.979 |
| RNAN_3757 | lolD | RNAN_3757 | RNAN_3313 | Peptide ABC transporter permease. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.955 |
| lolA | RNAN_0857 | RNAN_2792 | RNAN_0857 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC-type antimicrobial peptide transport system. | 0.514 |
| lolA | lolC | RNAN_2792 | RNAN_3314 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein-releasing system transmembrane protein lolC. | 0.891 |
| lolA | lolD | RNAN_2792 | RNAN_3313 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.886 |
| lolA | lolE | RNAN_2792 | RNAN_2998 | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Lipoprotein-releasing system transmembrane protein lolE. | 0.891 |
| lolC | lolA | RNAN_3314 | RNAN_2792 | Lipoprotein-releasing system transmembrane protein lolC. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.891 |
| lolC | lolD | RNAN_3314 | RNAN_3313 | Lipoprotein-releasing system transmembrane protein lolC. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.993 |
| lolD | RNAN_0603 | RNAN_3313 | RNAN_0603 | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | ABC transporter permease. | 0.708 |
| lolD | RNAN_0857 | RNAN_3313 | RNAN_0857 | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | ABC-type antimicrobial peptide transport system. | 0.777 |
| lolD | RNAN_0954 | RNAN_3313 | RNAN_0954 | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Hypothetical protein. | 0.647 |
| lolD | RNAN_3756 | RNAN_3313 | RNAN_3756 | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | Hypothetical protein. | 0.970 |
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