STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_0028PFAM: cytochrome c oxidase subunit II; KEGG: bbe:BBR47_04020 probable bo3-type cytochrome c oxidase. (158 aa)    
Predicted Functional Partners:
Btus_0027
PFAM: cytochrome c oxidase subunit I; KEGG: afl:Aflv_1359 cytochrome c oxidase (b(o/a)3- type) chain I; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
Btus_0434
KEGG: gym:GYMC10_0738 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit III.
 
 0.999
Btus_0426
PFAM: cytochrome c oxidase subunit I; KEGG: bbe:BBR47_04030 probable bo3-type cytochrome c oxidase; Belongs to the heme-copper respiratory oxidase family.
 
 0.998
Btus_0435
PFAM: cytochrome C oxidase subunit IV; KEGG: mcl:MCCL_0735 hypothetical protein.
 
 0.998
Btus_0433
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 
 0.994
Btus_0432
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.992
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.
  
 
 0.970
Btus_1703
PFAM: cytochrome c class I; KEGG: bbe:BBR47_24910 menaquinol-cytochrome c reductase cytochrome b/c subunit.
 
 
 0.941
Btus_1643
PFAM: cytochrome c class I; KEGG: eat:EAT1b_0893 cytochrome c class I.
 
 
 0.940
Btus_2763
PFAM: cytochrome c class I; KEGG: afl:Aflv_2560 cytochrome c551.
 
 
 0.939
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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