STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_0618Thioredoxin; KEGG: bbe:BBR47_16730 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family. (106 aa)    
Predicted Functional Partners:
Btus_0753
KEGG: bbe:BBR47_52630 probable thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 0.982
Btus_1563
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cag:Cagg_2685 thioredoxin reductase.
 
 0.965
Btus_0360
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: bbe:BBR47_13500 probable thioredoxin reductase.
 
 0.961
Btus_1986
Arsenate reductase (thioredoxin); SMART: Protein-tyrosine phosphatase, low molecular weight; TIGRFAM: arsenate reductase (thioredoxin); KEGG: aac:Aaci_0537 arsenate reductase (thioredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight.
  
 
 0.912
Btus_1987
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gtn:GTNG_2972 thioredoxin reductase-like protein.
 
 
 0.821
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
   
 
 0.809
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
 
  
 0.790
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
 
 
 0.765
Btus_2874
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aac:Aaci_1778 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.727
Btus_1793
KEGG: sth:STH230 glutamate synthase large subunit; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein.
   
 
 0.724
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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