STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_0698Hypothetical protein; KEGG: mmi:MMAR_1063 transcriptional regulatory protein. (118 aa)    
Predicted Functional Partners:
Btus_0695
PFAM: Type II secretion system F domain; KEGG: pfs:PFLU4079 putative general secretion pathway protein F.
       0.773
Btus_0696
KEGG: aac:Aaci_1809 hypothetical protein.
       0.773
Btus_0697
Hypothetical protein; KEGG: dau:Daud_0994 N-terminal methylation protein.
       0.773
Btus_0699
KEGG: hypothetical protein.
       0.773
Btus_0700
KEGG: mta:Moth_1546 hypothetical protein.
       0.773
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.615
Btus_0694
PFAM: type II secretion system protein E; KEGG: acr:Acry_0893 type II secretion system protein E.
       0.565
Btus_0702
KEGG: bbe:BBR47_19980 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II.
       0.561
Btus_0703
PFAM: amino acid-binding ACT domain protein; KEGG: gym:GYMC10_1549 amino acid-binding ACT domain protein; Belongs to the UPF0735 family.
       0.411
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.