STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_0753KEGG: bbe:BBR47_52630 probable thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (305 aa)    
Predicted Functional Partners:
Btus_0618
Thioredoxin; KEGG: bbe:BBR47_16730 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
 
 0.982
Btus_1977
TIGRFAM: glutaredoxin-like domain protein; KEGG: aac:Aaci_2537 glutaredoxin-like domain protein.
 
  
 0.923
Btus_0575
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.912
Btus_1294
KEGG: sth:STH927 hypothetical protein.
  
 
 0.680
Btus_0361
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: gym:GYMC10_5135 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
  
 
 0.645
Btus_1293
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; KEGG: sth:STH926 2-cys peroxiredoxin.
  
 
 0.645
Btus_1725
KEGG: gym:GYMC10_2657 general stress protein.
  
 
 0.609
cysS
TIGRFAM: cysteinyl-tRNA synthetase; KEGG: gtn:GTNG_0085 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.521
Btus_0752
PFAM: protein of unknown function DUF309; KEGG: bbe:BBR47_47480 hypothetical protein.
       0.517
Btus_1303
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bbe:BBR47_41920 molybdopterin biosynthesis protein MoeB.
  
  
 0.508
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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