STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_0895KEGG: hps:HPSH_01625 hypothetical protein. (112 aa)    
Predicted Functional Partners:
Btus_0894
PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rxy:Rxyl_2744 cobalamin synthesis protein, P47K.
   
   0.913
Btus_0896
PFAM: polysaccharide deacetylase; KEGG: cjd:JJD26997_0672 polysaccharide deacetylase family protein.
       0.571
Btus_0897
PFAM: Asparaginase/glutaminase; KEGG: bmr:BMI_I1982 L-asparaginase type II, putative.
       0.555
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.