STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_0989KEGG: bbe:BBR47_18730 hypothetical protein. (133 aa)    
Predicted Functional Partners:
Btus_3217
PFAM: Protein of unknown function DUF1779; KEGG: aac:Aaci_2754 hypothetical protein.
  
     0.747
Btus_0727
KEGG: aac:Aaci_1786 hypothetical protein.
  
    0.741
Btus_0038
PFAM: Protein of unknown function DUF2508; KEGG: mta:Moth_0030 hypothetical protein.
  
     0.695
Btus_2434
KEGG: aac:Aaci_2355 hypothetical protein.
  
     0.693
Btus_1691
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; KEGG: bbe:BBR47_25050 hypothetical protein.
  
     0.646
Btus_1329
KEGG: dae:Dtox_1125 hypothetical protein.
  
     0.641
Btus_0448
SMART: Hedgehog/intein hint domain protein; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: aac:Aaci_1886 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit.
  
     0.632
Btus_0073
KEGG: pjd:Pjdr2_0038 hypothetical protein.
  
     0.631
Btus_2153
KEGG: pjd:Pjdr2_0168 TPR repeat-containing protein.
  
     0.624
Btus_0212
KEGG: aac:Aaci_0356 outer membrane lipoprotein- sorting protein-like protein.
  
    0.601
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.