STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1003KEGG: gka:GK0676 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase. (425 aa)    
Predicted Functional Partners:
Btus_1004
TIGRFAM: malate synthase A; KEGG: aac:Aaci_2530 malate synthase A; PFAM: Malate synthase family protein; Belongs to the malate synthase family.
 
 0.999
Btus_1005
TIGRFAM: malate synthase A; KEGG: aac:Aaci_2530 malate synthase A; PFAM: Malate synthase family protein.
 
 0.998
Btus_2539
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
   
 
 0.928
Btus_1044
PFAM: aminotransferase class V; KEGG: ade:Adeh_2994 alanine-glyoxylate aminotransferase.
    
 0.914
Btus_0385
Glyoxylate reductase; KEGG: sth:STH3215 putative glycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region.
     
 0.912
Btus_1991
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; asparagine synthase; KEGG: bcl:ABC4036 glycolate oxidase iron-sulfur subunit.
     
 0.905
Btus_1992
PFAM: FAD linked oxidase domain protein; KEGG: bcl:ABC4037 glycolate oxidase subunit.
     
 0.905
Btus_2618
PFAM: FAD linked oxidase domain protein; KEGG: gtn:GTNG_1383 glycolate oxidase subunit.
     
 0.905
Btus_2619
PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: aac:Aaci_2533 protein of unknown function DUF224 cysteine-rich region domain protein.
     
 0.905
Btus_2620
PFAM: FAD linked oxidase domain protein; KEGG: aac:Aaci_2534 FAD linked oxidase domain protein.
     
 0.905
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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