STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1057KEGG: bbe:BBR47_48980 probable acetyl-CoA C- acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)    
Predicted Functional Partners:
Btus_1056
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; Enoyl-CoA hydratase/isomerase; KEGG: bbe:BBR47_48990 probable 3-hydroxyacyl-CoA dehydrogenase.
 
 0.999
Btus_0350
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aac:Aaci_1850 acyl-CoA dehydrogenase domain protein.
  
 0.937
Btus_1177
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: hau:Haur_1560 acyl-CoA dehydrogenase domain- containing protein.
  
 0.937
Btus_1268
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bpt:Bpet2270 acyl-CoA dehydrogenase.
  
 0.937
Btus_1727
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_3048 acyl-CoA dehydrogenase.
 
 0.937
Btus_2452
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_3048 acyl-CoA dehydrogenase.
 
 0.937
Btus_3274
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gtn:GTNG_3338 acyl-CoA dehydrogenase (short- chain specific).
  
 0.937
Btus_1288
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mes:Meso_3279 acyl-CoA dehydrogenase-like.
  
 0.936
Btus_1728
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_3048 acyl-CoA dehydrogenase.
 
 0.936
Btus_1315
PFAM: carboxyl transferase; KEGG: bbe:BBR47_26900 putative propionyl-CoA carboxylase.
  
 0.930
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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