STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1184KEGG: pjd:Pjdr2_5874 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; TPR repeat- containing protein; SMART: Tetratricopeptide repeat. (517 aa)    
Predicted Functional Partners:
Btus_1185
PFAM: glycosyl transferase family 2; TPR repeat- containing protein; KEGG: pjd:Pjdr2_5875 glycosyl transferase family 2.
 
 
 
0.849
Btus_1186
PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_4; KEGG: pjd:Pjdr2_5876 glycosyl transferase family 2.
 
   
0.849
Btus_1182
PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_5871 glycosyl transferase family 2.
 
     0.813
Btus_1187
KEGG: pjd:Pjdr2_5877 hypothetical protein.
       0.678
Btus_2841
KEGG: bcq:BCQ_4951 lantibiotic transport protein; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase.
  
  
 0.647
Btus_1491
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
 
 0.541
Btus_1517
KEGG: gym:GYMC10_4167 CheA signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; P2 response regulator binding domain protein; Hpt domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP- binding region ATPase domain protein.
   
    0.476
Btus_1188
KEGG: chy:CHY_2613 hypothetical protein.
       0.470
Btus_2422
PFAM: Lytic transglycosylase catalytic; KEGG: pjd:Pjdr2_1527 lytic transglycosylase catalytic.
 
    0.413
Btus_0590
PFAM: Lytic transglycosylase catalytic; KEGG: pth:PTH_0856 hypothetical protein.
 
    0.406
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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