STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1197PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_4077 nucleotidyl transferase. (240 aa)    
Predicted Functional Partners:
Btus_1198
PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_4078 NAD-dependent epimerase/dehydratase.
 
 
 0.968
Btus_0509
KEGG: rpb:RPB_1599 histidinol-phosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase.
 
 0.942
Btus_1196
PFAM: NAD-dependent epimerase/dehydratase; KEGG: sth:STH1369 UDP-glucose 4-epimerase.
 
 
 0.931
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
  
 0.912
Btus_1194
PFAM: glycosyl transferase group 1; KEGG: sth:STH1367 hypothetical protein.
 
 
 0.880
Btus_0866
KEGG: ddr:Deide_20315 putative dTDP-4- dehydrorhamnose 3,5-epimerase.
  
  
 0.834
Btus_0867
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
0.820
Btus_1195
PFAM: glycosyl transferase family 2; KEGG: sth:STH1362 glycosyl transferase.
  
 
 0.819
Btus_1199
PFAM: TrkA-N domain protein; UDP-glucose/GDP- mannose dehydrogenase dimerisation; KEGG: sth:STH1368 UDP-N-acetyl-D-mannosamine dehydrogenase.
 
   
 0.804
Btus_0864
KEGG: mth:MTH1789 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.695
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.