STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1211KEGG: aac:Aaci_2011 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; SMART: iron dependent repressor. (154 aa)    
Predicted Functional Partners:
metN
ABC transporter related protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.789
mntH
Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
  
 0.564
Btus_2409
KEGG: rca:Rcas_1590 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.545
Btus_1212
TIGRFAM: competence protein ComEA helix-hairpin- helix repeat protein; PFAM: Soluble ligand binding domain; KEGG: aau:AAur_2244 putative comEA protein; SMART: Helix-hairpin-helix DNA-binding class 1.
       0.534
Btus_1918
PFAM: ferric-uptake regulator; KEGG: ser:SERP1398 FUR family transcriptional regulator; Belongs to the Fur family.
  
  
 0.533
Btus_1213
ComEC/Rec2-related protein; KEGG: drm:Dred_2510 DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein.
       0.524
Btus_2408
PFAM: ABC-3 protein; KEGG: dhd:Dhaf_3000 ABC-3 protein.
  
  
 0.512
Btus_1321
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: afl:Aflv_0995 Fe2+ uptake regulation protein; Belongs to the Fur family.
  
  
 0.507
Btus_1910
PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: dsy:DSY4105 hypothetical protein.
   
    0.507
Btus_2411
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: aac:Aaci_2612 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.507
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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