STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1254KEGG: hmo:HM1_0011 hypothetical protein. (266 aa)    
Predicted Functional Partners:
Btus_1253
PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: mxa:MXAN_0438 MOSC domain-containing protein.
       0.775
Btus_3304
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.581
Btus_0226
PFAM: peptidase M22 glycoprotease; KEGG: gtn:GTNG_0212 glycoprotein endopeptidase.
  
    0.512
Btus_1255
KEGG: efe:EFER_3211 putative regulatory protein, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.503
Btus_1492
KEGG: afl:Aflv_1743 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.479
Btus_0259
PFAM: Peptidase M23; KEGG: mta:Moth_0246 peptidase M23B.
  
   0.436
Btus_0991
PFAM: polysaccharide biosynthesis protein; KEGG: aac:Aaci_2104 stage V sporulation protein B.
  
    0.416
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.