STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1319KEGG: bcy:Bcer98_2791 sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane. (213 aa)    
Predicted Functional Partners:
Btus_0721
KEGG: sth:STH1861 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB.
  
  
 0.861
Btus_0724
KEGG: pjd:Pjdr2_2298 stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE.
  
  
 0.833
Btus_0723
KEGG: pth:PTH_1169 hypothetical protein; TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD.
  
  
 0.802
Btus_0747
SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: gwc:GWCH70_2315 stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein.
 
   
 0.783
Btus_0092
SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: bbe:BBR47_01160 stage II sporulation protein E; PFAM: Stage II sporulation E family protein.
  
   
 0.779
Btus_1699
KEGG: aac:Aaci_1659 sporulation integral membrane protein YlbJ; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein.
  
   
 0.772
Btus_0722
KEGG: bbe:BBR47_23240 stage III sporulation protein AC; TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein.
  
  
 0.757
Btus_1778
KEGG: bcy:Bcer98_1896 spore germination YpeB; TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4.
  
     0.752
Btus_1848
PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: pjd:Pjdr2_3883 sigma-E processing peptidase SpoIIGA.
  
  
 0.741
Btus_0640
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: bbe:BBR47_17880 germination protein.
  
     0.729
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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