STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1362KEGG: aac:Aaci_3073 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein. (367 aa)    
Predicted Functional Partners:
Btus_3112
KEGG: dhd:Dhaf_0845 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
  
 0.797
Btus_0811
KEGG: pjd:Pjdr2_3143 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein.
 
  
 0.796
Btus_0482
TIGRFAM: germination protein, Ger(x)C family; KEGG: aac:Aaci_1265 germination protein, Ger(X)C family.
 
  
 0.775
Btus_3111
PFAM: GerA spore germination protein; KEGG: mta:Moth_2042 GerA spore germination protein.
 
  
 0.762
Btus_2251
PFAM: GerA spore germination protein; KEGG: mta:Moth_2042 GerA spore germination protein.
 
  
 0.760
Btus_0809
PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_3141 GerA spore germination protein.
 
  
 0.743
Btus_0721
KEGG: sth:STH1861 stage III sporulation protein SpoAB; TIGRFAM: stage III sporulation protein AB; PFAM: Sporulation stage III protein AB.
  
     0.712
Btus_1848
PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: pjd:Pjdr2_3883 sigma-E processing peptidase SpoIIGA.
  
     0.685
Btus_0480
PFAM: GerA spore germination protein; KEGG: aac:Aaci_0438 GerA spore germination protein.
 
  
 0.676
Btus_0484
Protein of unknown function DUF204; Probably functions as a manganese efflux pump.
  
     0.635
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.