STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1364TIGRFAM: CRISPR-associated protein, Crm2 family; KEGG: ttu:TERTU_4366 CRISPR-associated protein, Crm2 family. (607 aa)    
Predicted Functional Partners:
Btus_1365
PFAM: CRISPR-associated protein, Cmr3; KEGG: ttu:TERTU_4365 CRISPR-associated protein, Cmr3 family.
 
 
 
 0.995
Btus_1366
KEGG: ttu:TERTU_4364 CRISPR-associated RAMP protein, Cmr4 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.994
Btus_1368
KEGG: ttu:TERTU_4362 CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.993
Btus_1367
KEGG: dau:Daud_1819 CRISPR-associated Cmr5 family protein; TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1.
   
 
 0.972
Btus_1363
KEGG: bha:BH0327 hypothetical protein; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; PFAM: protein of unknown function DUF324.
 
 
 
 0.969
Btus_2247
PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_3293 hypothetical protein.
  
 
 0.890
Btus_2246
PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1859 hypothetical protein.
  
 
 0.877
Btus_1369
KEGG: mvu:Metvu_1220 CRISPR-associated protein, TM1812 family; TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein TM1812.
 
   
 0.859
cas1-2
CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
  
 0.568
Btus_2714
TIGRFAM: CRISPR-associated helicase Cas3; CRISPR- associated HD domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: dae:Dtox_4288 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase; helicase domain protein.
 
  
 0.491
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.