STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1618KEGG: app:CAP2UW1_3684 hypothetical protein. (302 aa)    
Predicted Functional Partners:
Btus_1619
KEGG: app:CAP2UW1_3683 hypothetical protein.
       0.773
Btus_3180
KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.602
Btus_1649
KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.595
Btus_1273
KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.571
Btus_2217
KEGG: aac:Aaci_2556 transposase IS4 family protein.
  
     0.556
Btus_2383
KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.555
Btus_0793
KEGG: aac:Aaci_2556 transposase IS4 family protein.
  
     0.532
Btus_2791
KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.524
Btus_2973
KEGG: aac:Aaci_3055 transposase IS4 family protein.
  
     0.430
Btus_1617
KEGG: aac:Aaci_0805 hypothetical protein.
       0.422
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.