STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1784PFAM: protein of unknown function DUF441; KEGG: bbe:BBR47_23170 hypothetical protein. (155 aa)    
Predicted Functional Partners:
Btus_1782
PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1678 major facilitator transporter.
 
     0.858
Btus_1783
Phosphosulfolactate synthase; KEGG: sth:STH2643 putative (2R)-phospho-3- sulfolactate synthase; PFAM: (2R)-phospho-3-sulfolactate synthase ComA.
 
     0.816
Btus_0717
KEGG: gtn:GTNG_2340 hypothetical protein.
 
     0.697
Btus_1024
KEGG: aac:Aaci_1004 hypothetical protein.
  
     0.548
Btus_3241
KEGG: hmo:HM1_1096 hypothetical protein.
 
     0.548
Btus_0602
KEGG: adg:Adeg_1649 shikimate/quinate 5- dehydrogenase.
  
     0.485
Btus_0769
KEGG: pjd:Pjdr2_2229 sporulation protein YqfC.
  
     0.421
Btus_1319
KEGG: bcy:Bcer98_2791 sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
  
     0.411
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.