STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_1922PFAM: protein of unknown function DUF421; protein of unknown function DUF1657; KEGG: afl:Aflv_2082 hypothetical protein. (290 aa)    
Predicted Functional Partners:
Btus_1921
KEGG: amt:Amet_4225 sporulation stage V, protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
 
  
 0.889
Btus_1920
KEGG: dae:Dtox_2380 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
 
  
 0.849
Btus_1923
PFAM: protein of unknown function DUF1657; KEGG: bbe:BBR47_41060 hypothetical protein.
 
     0.703
Btus_1829
KEGG: bha:BH1570 sporulation protein; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein.
 
  
 0.585
Btus_3111
PFAM: GerA spore germination protein; KEGG: mta:Moth_2042 GerA spore germination protein.
 
  
 0.529
Btus_2251
PFAM: GerA spore germination protein; KEGG: mta:Moth_2042 GerA spore germination protein.
 
  
 0.528
Btus_1831
KEGG: aac:Aaci_1743 stage V sporulation protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein.
 
  
 0.503
Btus_1830
KEGG: gym:GYMC10_1703 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.
 
  
 0.478
Btus_1221
KEGG: gwc:GWCH70_2443 stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
     0.475
Btus_0809
PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_3141 GerA spore germination protein.
 
  
 0.468
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.