STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_2123KEGG: rca:Rcas_1290 EmrB/QacA family drug resistance transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1. (481 aa)    
Predicted Functional Partners:
Btus_2124
PFAM: transcriptional regulator PadR family protein; KEGG: glo:Glov_0133 transcriptional regulator, PadR- like family.
       0.773
Btus_3114
PFAM: secretion protein HlyD family protein; KEGG: bcb:BCB4264_A4677 hypothetical protein.
 
 
 0.612
Btus_1301
PFAM: major facilitator superfamily MFS_1; KEGG: gyc:GYMC61_1255 major facilitator superfamily MFS_1.
  
     0.588
Btus_3165
PFAM: secretion protein HlyD family protein; KEGG: bbe:BBR47_13990 hypothetical protein.
 
 
 0.582
Btus_2125
PFAM: class II aldolase/adducin family protein; KEGG: afo:Afer_1874 class II aldolase/adducin family protein.
     
 0.516
Btus_3115
Multidrug resistance efflux pump-like protein; KEGG: drm:Dred_0454 secretion protein HlyD.
 
 
 0.480
Btus_1141
PFAM: Patatin; KEGG: bca:BCE_4900 phospholipase, putative.
 
      0.470
Btus_2122
KEGG: aac:Aaci_3026 YolD-like protein.
       0.453
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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