STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_2420PFAM: ROK family protein; KEGG: aac:Aaci_0086 glucokinase, ROK family. (316 aa)    
Predicted Functional Partners:
Btus_1356
Glucose-1,6-bisphosphate synthase; KEGG: gka:GK0570 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase.
 
 
 0.945
pgi
KEGG: aac:Aaci_0085 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); Belongs to the GPI family.
 
 
 0.943
Btus_0688
TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: gtn:GTNG_3398 mannnose-6 phosphate isomelase; PFAM: mannose-6-phosphate isomerase type I; Belongs to the mannose-6-phosphate isomerase type 1 family.
 
  
 0.925
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.859
Btus_2647
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.833
Btus_2875
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.833
Btus_2867
TIGRFAM: ketose-bisphosphate aldolase; KEGG: bbe:BBR47_54890 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.830
Btus_3269
TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: hor:Hore_18020 fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II.
    
 0.830
Btus_0564
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: bbe:BBR47_44880 probable N-acetylglucosamine- 6-phosphate deacetylase; PFAM: amidohydrolase.
 
  
 0.629
Btus_2430
KEGG: bbe:BBR47_13840 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region; Belongs to the pyruvate kinase family.
 
   
 0.624
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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