STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_2484Hypothetical protein; KEGG: fre:Franean1_0402 integrase catalytic region. (121 aa)    
Predicted Functional Partners:
Btus_2485
KEGG: bcy:Bcer98_3325 GAF domain-containing protein.
       0.709
Btus_2486
KEGG: tro:trd_0158 hypothetical protein.
       0.709
Btus_2487
PFAM: SirA family protein; KEGG: tro:trd_0160 uncharacterized protein family UPF0033; Belongs to the sulfur carrier protein TusA family.
       0.695
Btus_2480
PFAM: biotin/lipoate A/B protein ligase; KEGG: mta:Moth_0443 biotin/lipoate A/B protein ligase.
       0.642
gcvH-2
Glycine cleavage system H protein; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.
       0.642
Btus_2482
PFAM: biotin/lipoate A/B protein ligase; KEGG: cts:Ctha_0125 biotin/lipoate A/B protein ligase.
       0.642
Btus_2483
KEGG: afl:Aflv_2346 peroxiredoxin family protein.
       0.642
Btus_2488
PFAM: biotin/lipoate A/B protein ligase; KEGG: tro:trd_0142 hypothetical protein.
       0.628
Btus_2478
KEGG: mta:Moth_0446 radical SAM family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.540
Btus_2479
KEGG: mta:Moth_0445 radical SAM family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.540
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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