STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_2769KEGG: rxy:Rxyl_0114 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase. (286 aa)    
Predicted Functional Partners:
Btus_2770
PFAM: VWA containing CoxE family protein; KEGG: rmr:Rmar_2769 VWA containing CoxE family protein.
 
   
 0.951
Btus_2768
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: dge:Dgeo_0213 carbon monoxide dehydrogenase subunit G.
 
     0.852
Btus_2628
PFAM: VWA containing CoxE family protein; KEGG: rmr:Rmar_2376 VWA containing CoxE family protein.
 
   
 0.784
Btus_2631
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: tro:trd_1207 oxidoreductase, large chain.
 
   
 0.732
Btus_2633
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: chl:Chy400_3739 carbon monoxide dehydrogenase subunit G.
 
     0.689
Btus_2767
YHS domain protein; KEGG: tro:trd_A0563 xanthine dehydrogenase accessory factor, putative subfamily, putative; PFAM: YHS domain protein; SMART: TRASH domain protein.
 
     0.631
Btus_2630
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: tro:trd_1208 carbon monoxide dehydrogenase medium chain.
 
   
 0.546
Btus_2435
Malate dehydrogenase (oxaloacetate- decarboxylating); KEGG: bld:BLi03071 YtsJ; PFAM: malic protein NAD-binding; malic protein domain protein.
  
    0.441
Btus_2331
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: tro:trd_A0775 carbon monoxide dehydrogenase large chain (COdehydrogenase subunit L) (CO-DH L).
 
   
 0.436
Btus_2333
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: tro:trd_0577 carbon monoxide dehydrogenase medium chain.
 
   
 0.433
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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