STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_3176PFAM: transposase IS4 family protein; KEGG: dau:Daud_2194 transposase, IS4 family protein. (433 aa)    
Predicted Functional Partners:
Btus_2536
KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.695
Btus_2788
KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.695
Btus_1353
KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.693
Btus_2248
KEGG: rrs:RoseRS_1861 hypothetical protein.
  
     0.667
Btus_0279
TIGRFAM: transposase, IS605 OrfB family; KEGG: adg:Adeg_1869 transposase, IS605 OrfB family.
  
     0.663
Btus_2247
PFAM: protein of unknown function DUF324; KEGG: rca:Rcas_3293 hypothetical protein.
  
     0.630
Btus_1797
KEGG: dau:Daud_0713 IS605 family transposase OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.627
Btus_2246
PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1859 hypothetical protein.
  
     0.580
Btus_2791
KEGG: adg:Adeg_0154 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB.
  
     0.568
Btus_2244
KEGG: rrs:RoseRS_1857 hypothetical protein; PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF324; SMART: Cold shock protein.
  
     0.494
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.