STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_3205KEGG: swo:Swol_0747 hypothetical protein. (219 aa)    
Predicted Functional Partners:
Btus_0038
PFAM: Protein of unknown function DUF2508; KEGG: mta:Moth_0030 hypothetical protein.
  
     0.728
Btus_1770
KEGG: tte:TTE1621 hypothetical protein.
  
     0.725
Btus_3217
PFAM: Protein of unknown function DUF1779; KEGG: aac:Aaci_2754 hypothetical protein.
  
     0.703
Btus_1329
KEGG: dae:Dtox_1125 hypothetical protein.
  
     0.635
Btus_0640
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: bbe:BBR47_17880 germination protein.
  
     0.572
Btus_3264
KEGG: bbe:BBR47_22900 hypothetical protein.
  
     0.565
Btus_2995
KEGG: ate:Athe_1678 hypothetical protein.
 
     0.515
Btus_0810
KEGG: pjd:Pjdr2_3142 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
     0.458
Btus_3206
Response regulator receiver protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: aac:Aaci_2744 transcriptional regulator, LuxR family; SMART: regulatory protein LuxR.
       0.446
Btus_2184
PDZ/DHR/GLGF domain protein; KEGG: gym:GYMC10_5838 cell division topological determinant; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein.
  
     0.434
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.