STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_3247PFAM: SirA family protein; KEGG: kse:Ksed_00560 predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family. (75 aa)    
Predicted Functional Partners:
Btus_3248
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: efe:EFER_2096 conserved hypothetical protein; putative inner membrane protein.
  
 0.989
Btus_1095
Cysteine desulfurase; KEGG: gka:GK2564 iron-sulfur cofactor synthesis; PFAM: aminotransferase class V.
   
 
 0.652
Btus_1472
KEGG: hmo:HM1_1864 cysteine desulfurase family protein; PFAM: aminotransferase class V.
   
 
 0.652
Btus_1892
Cysteine desulfurase; KEGG: hor:Hore_22050 aminotransferase class V; PFAM: aminotransferase class V.
   
 
 0.652
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
   0.474
Btus_3245
PFAM: conserved hypothetical protein; KEGG: sth:STH78 hypothetical protein; Belongs to the UPF0340 family.
       0.450
Btus_3246
TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: afl:Aflv_2715 ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase.
       0.450
Btus_3249
Protein tyrosine phosphatase; KEGG: bbe:BBR47_54720 low molecular weight protein- tyrosine-phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight.
       0.422
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
       0.407
Btus_2483
KEGG: afl:Aflv_2346 peroxiredoxin family protein.
  
  
 0.406
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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