STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Btus_3290PFAM: extracellular solute-binding protein family 1; KEGG: cya:CYA_2782 iron ABC transporter iron- binding subunit. (349 aa)    
Predicted Functional Partners:
Btus_3289
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3625 ABC transport system permease protein.
 
 
 0.998
Btus_3288
KEGG: avn:Avin_21300 ABC transporter, ATP binding component; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.983
Btus_2230
PFAM: major facilitator superfamily MFS_1; KEGG: stm:STM3832 putative permease.
  
  
 0.675
Btus_1504
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.621
Btus_1074
ABC transporter related protein; KEGG: rle:pRL120171 putative ATP-binding component of ABC transporter; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase.
 
  
 0.593
Btus_2093
PFAM: extracellular solute-binding protein family 1; KEGG: mta:Moth_1484 extracellular solute-binding protein.
 
  
 0.592
Btus_2621
PFAM: iron permease FTR1; KEGG: bbe:BBR47_57390 hypothetical protein.
   
  
 0.555
Btus_1676
KEGG: ttj:TTHB175 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.538
Btus_0464
PFAM: major facilitator superfamily MFS_1; KEGG: bld:BLi03697 hypothetical protein.
  
  
 0.522
Btus_0825
PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_4993 major facilitator transporter.
  
  
 0.522
Your Current Organism:
Kyrpidia tusciae
NCBI taxonomy Id: 562970
Other names: Bacillus tusciae DSM 2912, K. tusciae DSM 2912, Kyrpidia tusciae DSM 2912, Kyrpidia tusciae NBRC 15312, Kyrpidia tusciae str. DSM 2912, Kyrpidia tusciae strain DSM 2912
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