Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGW47707.1 | EGW47708.1 | HMPREF0666_01164 | HMPREF0666_01165 | Hypothetical protein. | Hypothetical protein. | 0.621 |
EGW47707.1 | EGW47709.1 | HMPREF0666_01164 | HMPREF0666_01166 | Hypothetical protein. | Saccharopine dehydrogenase. | 0.401 |
EGW47707.1 | EGW47710.1 | HMPREF0666_01164 | HMPREF0666_01167 | Hypothetical protein. | Hypothetical protein. | 0.401 |
EGW47708.1 | EGW47707.1 | HMPREF0666_01165 | HMPREF0666_01164 | Hypothetical protein. | Hypothetical protein. | 0.621 |
EGW47708.1 | EGW47709.1 | HMPREF0666_01165 | HMPREF0666_01166 | Hypothetical protein. | Saccharopine dehydrogenase. | 0.660 |
EGW47708.1 | EGW47710.1 | HMPREF0666_01165 | HMPREF0666_01167 | Hypothetical protein. | Hypothetical protein. | 0.629 |
EGW47708.1 | recA | HMPREF0666_01165 | HMPREF0666_01168 | Hypothetical protein. | recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.620 |
EGW47709.1 | EGW47707.1 | HMPREF0666_01166 | HMPREF0666_01164 | Saccharopine dehydrogenase. | Hypothetical protein. | 0.401 |
EGW47709.1 | EGW47708.1 | HMPREF0666_01166 | HMPREF0666_01165 | Saccharopine dehydrogenase. | Hypothetical protein. | 0.660 |
EGW47709.1 | EGW47710.1 | HMPREF0666_01166 | HMPREF0666_01167 | Saccharopine dehydrogenase. | Hypothetical protein. | 0.839 |
EGW47709.1 | recA | HMPREF0666_01166 | HMPREF0666_01168 | Saccharopine dehydrogenase. | recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.767 |
EGW47710.1 | EGW47707.1 | HMPREF0666_01167 | HMPREF0666_01164 | Hypothetical protein. | Hypothetical protein. | 0.401 |
EGW47710.1 | EGW47708.1 | HMPREF0666_01167 | HMPREF0666_01165 | Hypothetical protein. | Hypothetical protein. | 0.629 |
EGW47710.1 | EGW47709.1 | HMPREF0666_01167 | HMPREF0666_01166 | Hypothetical protein. | Saccharopine dehydrogenase. | 0.839 |
EGW47710.1 | recA | HMPREF0666_01167 | HMPREF0666_01168 | Hypothetical protein. | recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.777 |
recA | EGW47708.1 | HMPREF0666_01168 | HMPREF0666_01165 | recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.620 |
recA | EGW47709.1 | HMPREF0666_01168 | HMPREF0666_01166 | recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Saccharopine dehydrogenase. | 0.767 |
recA | EGW47710.1 | HMPREF0666_01168 | HMPREF0666_01167 | recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Hypothetical protein. | 0.777 |