Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGW46652.1 | EGW47582.1 | HMPREF0666_02143 | HMPREF0666_01264 | Hypothetical protein. | Hypothetical protein. | 0.718 |
EGW46652.1 | EGW49075.1 | HMPREF0666_02143 | HMPREF0666_03103 | Hypothetical protein. | Hypothetical protein. | 0.485 |
EGW46652.1 | rpoA | HMPREF0666_02143 | HMPREF0666_02324 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.413 |
EGW46816.1 | EGW47582.1 | HMPREF0666_01918 | HMPREF0666_01264 | Hypothetical protein. | Hypothetical protein. | 0.818 |
EGW46816.1 | EGW48013.1 | HMPREF0666_01918 | HMPREF0666_00798 | Hypothetical protein. | Hypothetical protein. | 0.512 |
EGW47402.1 | EGW47582.1 | HMPREF0666_01415 | HMPREF0666_01264 | Hypothetical protein. | Hypothetical protein. | 0.819 |
EGW47402.1 | EGW48013.1 | HMPREF0666_01415 | HMPREF0666_00798 | Hypothetical protein. | Hypothetical protein. | 0.537 |
EGW47582.1 | EGW46652.1 | HMPREF0666_01264 | HMPREF0666_02143 | Hypothetical protein. | Hypothetical protein. | 0.718 |
EGW47582.1 | EGW46816.1 | HMPREF0666_01264 | HMPREF0666_01918 | Hypothetical protein. | Hypothetical protein. | 0.818 |
EGW47582.1 | EGW47402.1 | HMPREF0666_01264 | HMPREF0666_01415 | Hypothetical protein. | Hypothetical protein. | 0.819 |
EGW47582.1 | EGW48013.1 | HMPREF0666_01264 | HMPREF0666_00798 | Hypothetical protein. | Hypothetical protein. | 0.916 |
EGW47582.1 | EGW49075.1 | HMPREF0666_01264 | HMPREF0666_03103 | Hypothetical protein. | Hypothetical protein. | 0.785 |
EGW47582.1 | EGW49299.1 | HMPREF0666_01264 | HMPREF0666_02865 | Hypothetical protein. | Hypothetical protein; Belongs to the glutamine synthetase family. | 0.804 |
EGW47582.1 | dnaJ | HMPREF0666_01264 | HMPREF0666_00256 | Hypothetical protein. | Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.818 |
EGW47582.1 | rpoA | HMPREF0666_01264 | HMPREF0666_02324 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.796 |
EGW47582.1 | rpoB | HMPREF0666_01264 | HMPREF0666_02271 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.841 |
EGW47582.1 | rpoC | HMPREF0666_01264 | HMPREF0666_02272 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.809 |
EGW48013.1 | EGW46816.1 | HMPREF0666_00798 | HMPREF0666_01918 | Hypothetical protein. | Hypothetical protein. | 0.512 |
EGW48013.1 | EGW47402.1 | HMPREF0666_00798 | HMPREF0666_01415 | Hypothetical protein. | Hypothetical protein. | 0.537 |
EGW48013.1 | EGW47582.1 | HMPREF0666_00798 | HMPREF0666_01264 | Hypothetical protein. | Hypothetical protein. | 0.916 |
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