Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EGW46181.1 | EGW46182.1 | HMPREF0666_02587 | HMPREF0666_02588 | Hypothetical protein. | Hypothetical protein. | 0.860 |
EGW46181.1 | EGW46183.1 | HMPREF0666_02587 | HMPREF0666_02589 | Hypothetical protein. | Hypothetical protein. | 0.751 |
EGW46181.1 | EGW46184.1 | HMPREF0666_02587 | HMPREF0666_02590 | Hypothetical protein. | Hypothetical protein. | 0.553 |
EGW46181.1 | EGW47401.1 | HMPREF0666_02587 | HMPREF0666_01414 | Hypothetical protein. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.617 |
EGW46181.1 | EGW48024.1 | HMPREF0666_02587 | HMPREF0666_00809 | Hypothetical protein. | Hypothetical protein. | 0.542 |
EGW46181.1 | EGW48338.1 | HMPREF0666_02587 | HMPREF0666_00586 | Hypothetical protein. | Hypothetical protein. | 0.555 |
EGW46181.1 | EGW48493.1 | HMPREF0666_02587 | HMPREF0666_00377 | Hypothetical protein. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.615 |
EGW46181.1 | EGW49119.1 | HMPREF0666_02587 | HMPREF0666_03050 | Hypothetical protein. | Hypothetical protein. | 0.754 |
EGW46181.1 | guaB | HMPREF0666_02587 | HMPREF0666_02586 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.799 |
EGW46181.1 | mutL | HMPREF0666_02587 | HMPREF0666_02591 | Hypothetical protein. | DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.683 |
EGW46182.1 | EGW46181.1 | HMPREF0666_02588 | HMPREF0666_02587 | Hypothetical protein. | Hypothetical protein. | 0.860 |
EGW46182.1 | EGW46183.1 | HMPREF0666_02588 | HMPREF0666_02589 | Hypothetical protein. | Hypothetical protein. | 0.819 |
EGW46182.1 | EGW46184.1 | HMPREF0666_02588 | HMPREF0666_02590 | Hypothetical protein. | Hypothetical protein. | 0.583 |
EGW46182.1 | EGW47401.1 | HMPREF0666_02588 | HMPREF0666_01414 | Hypothetical protein. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.623 |
EGW46182.1 | EGW48338.1 | HMPREF0666_02588 | HMPREF0666_00586 | Hypothetical protein. | Hypothetical protein. | 0.530 |
EGW46182.1 | EGW48493.1 | HMPREF0666_02588 | HMPREF0666_00377 | Hypothetical protein. | Hypothetical protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.616 |
EGW46182.1 | EGW49119.1 | HMPREF0666_02588 | HMPREF0666_03050 | Hypothetical protein. | Hypothetical protein. | 0.700 |
EGW46182.1 | guaB | HMPREF0666_02588 | HMPREF0666_02586 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.784 |
EGW46182.1 | mutL | HMPREF0666_02588 | HMPREF0666_02591 | Hypothetical protein. | DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.702 |
EGW46183.1 | EGW46181.1 | HMPREF0666_02589 | HMPREF0666_02587 | Hypothetical protein. | Hypothetical protein. | 0.751 |
page 1 of 3