STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_0388KEGG: tdn:Suden_1810 hypothetical protein. (174 aa)    
Predicted Functional Partners:
Saut_0387
COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: tdn:Suden_1811 prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: A1HNK5 4-hydroxybenzoate polyprenyltransferase, putative; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
       0.821
Saut_0389
KEGG: tdn:Suden_1809 hypothetical protein.
       0.821
Saut_0390
Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182:IPR018365; KEGG: tdn:Suden_1808 cell cycle protein; PFAM: cell cycle protein; SPTR: P56096 Probable cell division protein ftsW; PFAM: Cell cycle protein; Belongs to the SEDS family.
       0.782
murG
Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
       0.766
Saut_0392
SNARE associated Golgi protein-related protein; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: tdn:Suden_1806 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: A0YUB7 DedA family protein; PFAM: SNARE associated Golgi protein.
       0.766
Saut_0393
KEGG: sun:SUN_0309 hypothetical protein; PFAM: Protein of unknown function (DUF420).
       0.766
Saut_0394
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COGs: COG1225 Peroxiredoxin; InterPro IPR000866:IPR013740; KEGG: sun:SUN_0313 peroxiredoxin family protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; SPTR: A0ZDT7 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Malallergen; PFAM: AhpC/TSA family.
       0.686
Saut_0386
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR019494:IPR013702:IPR013656:IPR 013767:IPR003594:IPR003661:IPR013655:IPR008207:IPR001789:I PR001610:IPR000014:IPR000700:IPR005467; KEGG: gme:Gmet_1707 PAS/PAC sensor hybrid histidine kinase; PFAM: domain of unknown function DUF1745; FIST C domain; PAS fold-4 domain protein; PAS fold domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; Hpt domain protein; response regulator receiver; SMART: response regulator receiver; histidine kinase A domain prot [...]
       0.584
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
       0.466
Saut_0384
Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: dma:DMR_01830 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; SPTR: Q1I2L0 Cardiolipin synthetase; PFAM: Phospholipase D Active site motif.
       0.416
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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