STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_0468Conserved hypothetical protein; COGs: COG1808 membrane protein; InterPro IPR005240:IPR013031; KEGG: dal:Dalk_0015 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: A0B8J5 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF389); TIGRFAM: conserved hypothetical protein TIGR00341; uncharacterized hydrophobic domain. (334 aa)    
Predicted Functional Partners:
Saut_0467
COGs: COG0058 Glucan phosphorylase; InterPro IPR000811:IPR011834; KEGG: sun:SUN_1278 glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: A0B900 Alpha-glucan phosphorylases; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases.
 
     0.790
Saut_0466
COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: sun:SUN_1452 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: Q8KEG7 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family.
       0.746
Saut_0469
COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR000173:IPR006424; KEGG: sun:SUN_1212 glyceraldehyde 3-phosphate dehydrogenase; PFAM: glyceraldehyde 3-phosphate dehydrogenase; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: A7I7U0 Glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, [...]
       0.618
Saut_0470
17 kDa surface antigen; InterPro IPR008816; KEGG: nis:NIS_1071 hypothetical protein; PFAM: 17 kDa surface antigen; SPTR: A2WCU6 Outer membrane lipoprotein; PFAM: Rickettsia 17 kDa surface antigen.
       0.579
Saut_0471
Phosphoglucomutase, alpha-D-glucose phosphate-specific; COGs: COG0033 Phosphoglucomutase; InterPro IPR005841:IPR005844:IPR005846:IPR005843:IPR 005845:IPR016066:IPR005852; KEGG: sun:SUN_1277 phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: P38569 Phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: Phosphoglucomutase/phosphomannomuta [...]
       0.579
Saut_0465
Radical SAM domain protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197:IPR006638; KEGG: sun:SUN_1453 [pyruvate formate-lyase]-activating enzyme; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: C4LZZ7 Radical SAM domain protein; PFAM: Radical SAM superfamily.
       0.513
pgi
COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672:IPR018189; KEGG: sun:SUN_1276 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: Q9PMD4 Probable glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
 
     0.470
Saut_0472
Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005844:IPR001451:IPR005835; KEGG: sun:SUN_1275 mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; transferase hexapeptide repeat containing protein; SPTR: A3ILX5 Mannose-1-phosphate guanyltransferase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Nucle [...]
       0.406
Saut_0473
Glycoside hydrolase family 57; COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR004300; KEGG: sun:SUN_1274 glycoside hydrolase; PFAM: glycoside hydrolase family 57; SPTR: A3EQN9 Alpha-amylase/alpha-mannosidase; PFAM: Glycosyl hydrolase family 57.
       0.400
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.