Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Saut_0641 | Saut_0642 | Saut_0641 | Saut_0642 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633:IPR000160:IPR013767:IPR013656:IPR 000014:IPR000700:IPR000215; KEGG: sun:SUN_1481 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: A2V3S4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS [...] | SEC-C motif domain protein; COGs: COG3012 conserved hypothetical protein; InterPro IPR004027; KEGG: tdn:Suden_1160 SecC motif-containing protein; PFAM: SEC-C motif domain protein; SPTR: A0Y040 Putative uncharacterized protein; PFAM: SEC-C motif. | 0.697 |
Saut_0641 | Saut_0643 | Saut_0641 | Saut_0643 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633:IPR000160:IPR013767:IPR013656:IPR 000014:IPR000700:IPR000215; KEGG: sun:SUN_1481 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: A2V3S4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS [...] | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.540 |
Saut_0641 | ackA | Saut_0641 | Saut_0644 | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633:IPR000160:IPR013767:IPR013656:IPR 000014:IPR000700:IPR000215; KEGG: sun:SUN_1481 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: A2V3S4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS [...] | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.506 |
Saut_0642 | Saut_0641 | Saut_0642 | Saut_0641 | SEC-C motif domain protein; COGs: COG3012 conserved hypothetical protein; InterPro IPR004027; KEGG: tdn:Suden_1160 SecC motif-containing protein; PFAM: SEC-C motif domain protein; SPTR: A0Y040 Putative uncharacterized protein; PFAM: SEC-C motif. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633:IPR000160:IPR013767:IPR013656:IPR 000014:IPR000700:IPR000215; KEGG: sun:SUN_1481 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: A2V3S4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS [...] | 0.697 |
Saut_0642 | Saut_0643 | Saut_0642 | Saut_0643 | SEC-C motif domain protein; COGs: COG3012 conserved hypothetical protein; InterPro IPR004027; KEGG: tdn:Suden_1160 SecC motif-containing protein; PFAM: SEC-C motif domain protein; SPTR: A0Y040 Putative uncharacterized protein; PFAM: SEC-C motif. | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.628 |
Saut_0642 | ackA | Saut_0642 | Saut_0644 | SEC-C motif domain protein; COGs: COG3012 conserved hypothetical protein; InterPro IPR004027; KEGG: tdn:Suden_1160 SecC motif-containing protein; PFAM: SEC-C motif domain protein; SPTR: A0Y040 Putative uncharacterized protein; PFAM: SEC-C motif. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.556 |
Saut_0643 | Saut_0641 | Saut_0643 | Saut_0641 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633:IPR000160:IPR013767:IPR013656:IPR 000014:IPR000700:IPR000215; KEGG: sun:SUN_1481 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: A2V3S4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS [...] | 0.540 |
Saut_0643 | Saut_0642 | Saut_0643 | Saut_0642 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | SEC-C motif domain protein; COGs: COG3012 conserved hypothetical protein; InterPro IPR004027; KEGG: tdn:Suden_1160 SecC motif-containing protein; PFAM: SEC-C motif domain protein; SPTR: A0Y040 Putative uncharacterized protein; PFAM: SEC-C motif. | 0.628 |
Saut_0643 | ackA | Saut_0643 | Saut_0644 | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.999 |
ackA | Saut_0641 | Saut_0644 | Saut_0641 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR001633:IPR000160:IPR013767:IPR013656:IPR 000014:IPR000700:IPR000215; KEGG: sun:SUN_1481 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; SPTR: A2V3S4 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS [...] | 0.506 |
ackA | Saut_0642 | Saut_0644 | Saut_0642 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | SEC-C motif domain protein; COGs: COG3012 conserved hypothetical protein; InterPro IPR004027; KEGG: tdn:Suden_1160 SecC motif-containing protein; PFAM: SEC-C motif domain protein; SPTR: A0Y040 Putative uncharacterized protein; PFAM: SEC-C motif. | 0.556 |
ackA | Saut_0643 | Saut_0644 | Saut_0643 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.999 |