STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_0656YceI family protein; InterPro IPR007372; KEGG: tdn:Suden_0893 hypothetical protein; PFAM: YceI family protein; SPTR: A2U327 Putative uncharacterized protein; PFAM: YceI-like domain. (183 aa)    
Predicted Functional Partners:
Saut_1623
Polysulphide reductase NrfD; InterPro IPR005614; KEGG: tdn:Suden_0499 polysulphide reductase, NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Q8ZUB6 Molybdopterin oxidoreductase, membrane subunit; PFAM: Polysulphide reductase, NrfD.
  
     0.572
Saut_0654
KEGG: tdn:Suden_0629 hypothetical protein.
       0.565
Saut_0655
KEGG: tdn:Suden_1786 hypothetical protein.
       0.565
Saut_2129
KEGG: tdn:Suden_2051 hypothetical protein; SPTR: B7GAJ8 Predicted protein.
  
     0.549
Saut_1855
InterPro IPR001623; KEGG: tdn:Suden_1842 heat shock protein DnaJ-like; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; PFAM: DnaJ domain.
  
     0.521
Saut_1622
Molybdopterin oxidoreductase Fe4S4 region; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006963:IPR006657:IPR006311; KEGG: nis:NIS_0573 molybdopterin oxidoreductase; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: B3V6W1 Molybdopterin oxidoreductase:molydopterin dinucleotide-binding region:molybdopterin oxidoreductase Fe4S4 region; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM [...]
  
     0.464
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
  
 0.445
Saut_0635
KEGG: tdn:Suden_1508 hypothetical protein; SPTR: C1FJ08 Predicted protein.
  
     0.436
Saut_1016
Cytochrome c assembly protein; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: tdn:Suden_0916 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: A2U069 Cytochrome c assembly protein; PFAM: ResB-like family; Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
 
     0.432
Saut_1567
KEGG: tdn:Suden_0581 hypothetical protein; PFAM: YfaZ precursor.
  
     0.428
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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