STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_0726COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR006066:IPR006067:IPR005117; KEGG: nis:NIS_1436 ferredoxin--nitrite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Ferredoxin--nitrite reductase; SPTR: P39661 Ferredoxin--nitrite reductase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain. (638 aa)    
Predicted Functional Partners:
Saut_0727
Major facilitator superfamily MFS_1; COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: sun:SUN_1491 NarK/NasA family nitrate transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A3L6X8 Nitrate transporter; PFAM: Major Facilitator Superfamily.
 
  
 0.984
Saut_0049
Nitrite and sulphite reductase 4Fe-4S region; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR006067:IPR005117:IPR006066; KEGG: tdn:Suden_1241 ferredoxin--nitrite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; SPTR: A0YL91 Nitrite reductase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain.
  
  
 
0.925
Saut_0740
COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: tdn:Suden_0721 2-nitropropane dioxygenase, NPD; PFAM: 2-nitropropane dioxygenase NPD; SPTR: A3RPU6 Enoyl-[acyl-carrier protein] reductase (NADH); PFAM: 2-nitropropane dioxygenase.
    
  0.914
Saut_1531
COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006095:IPR006097:IPR006096; KEGG: dds:Ddes_1152 glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: P55990 NADP-specific glutamate dehydrogenase; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.914
Saut_1878
COGs: COG0174 Glutamine synthetase; InterPro IPR008146:IPR008147:IPR002345:IPR004809; KEGG: sun:SUN_0353 glutamine synthase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: P94845 Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.
     
 0.914
napA
Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
    
 0.903
Saut_0855
COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: tdn:Suden_0762 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: A1RZK0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase.
     
 0.902
Saut_1248
COGs: COG3043 Nitrate reductase cytochrome c-type subunit; KEGG: tdn:Suden_1517 periplasmic nitrate reductase; SPTR: A2V5A7 Nitrate reductase cytochrome c-type subunit (NapB); PFAM: Nitrate reductase cytochrome c-type subunit (NapB).
     
  0.900
Saut_0835
uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878:IPR003043:IPR006366; KEGG: tdn:Suden_1989 uroporphyrinogen-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: A1HSI5 Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.889
cysD
Sulfate adenylyltransferase subunit 2; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500:IPR011784; KEGG: sun:SUN_1722 sulfate adenylyltransferase subunit 2; PFAM: phosphoadenosine phosphosulfate reductase; SPTR: A6QB13 Sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit.
  
  
 0.838
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.