STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_0907FxsA cytoplasmic membrane protein; InterPro IPR007313; KEGG: tdn:Suden_0861 hypothetical protein; PFAM: FxsA cytoplasmic membrane protein; SPTR: P37147 UPF0716 protein fxsA; PFAM: FxsA cytoplasmic membrane protein. (143 aa)    
Predicted Functional Partners:
Saut_0904
Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: tdn:Suden_0858 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: B6TA22 Decaprenyl-diphosphate synthase subunit 1; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.821
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.821
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
       0.821
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
       0.821
Saut_0903
KEGG: tdn:Suden_0857 hypothetical protein.
       0.803
Saut_0910
COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: tdn:Suden_0864 3-octaprenyl-4hydroxybenzoate decarboxylase; PFAM: Carboxylyase-related protein; SPTR: Q9ZKF3 Uncharacterized protein jhp_0985; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; Belongs to the UbiD family.
       0.803
Saut_0908
DSBA oxidoreductase; InterPro IPR001853; KEGG: tdn:Suden_0862 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; PFAM: DSBA-like thioredoxin domain.
       0.799
Saut_0940
Protein of unknown function DUF342; InterPro IPR005646; KEGG: tdn:Suden_1210 hypothetical protein; PFAM: protein of unknown function DUF342; SPTR: A3IDS1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).
 
     0.767
Saut_0879
InterPro IPR005186; KEGG: tdn:Suden_1372 flagellar protein FlaG protein; PFAM: flagellar protein FlaG protein; PFAM: FlaG protein.
 
     0.739
Saut_1968
PDP protein; KEGG: tdn:Suden_0077 PDP protein; SPTR: A0NT30 Putative uncharacterized protein; PFAM: MgtE intracellular N domain.
  
     0.733
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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