STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_1014Hypothetical protein; InterPro IPR011031; KEGG: sun:SUN_1068 hypothetical protein. (718 aa)    
Predicted Functional Partners:
Saut_1015
MORN variant repeat protein; COGs: COG2849 conserved hypothetical protein; InterPro IPR011652; KEGG: hhe:HH0490 hypothetical protein; PFAM: MORN variant repeat protein; SPTR: A2UWI7 MORN variant; PFAM: MORN repeat variant.
       0.773
Saut_1013
Hypothetical protein.
       0.697
Saut_1016
Cytochrome c assembly protein; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: tdn:Suden_0916 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: A2U069 Cytochrome c assembly protein; PFAM: ResB-like family; Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
       0.558
Saut_1012
Hypothetical protein.
       0.420
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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