STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_1319Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: sun:SUN_0275 RND efflux transporter; PFAM: acriflavin resistance protein; SPTR: A1HLV2 Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1013 aa)    
Predicted Functional Partners:
Saut_1320
KEGG: sun:SUN_0274 efflux system, membrane fusion protein; SPTR: A3J714 Cation or acridine efflux membrane fusion protein; PFAM: HlyD family secretion protein.
 
 
 0.949
Saut_1321
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: tdn:Suden_1442 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A2TXB3 Outer membrane efflux protein; PFAM: Outer membrane efflux protein.
 
 
 0.914
Saut_1322
Transcriptional regulator, TetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: sun:SUN_0272 hypothetical protein; PFAM: regulatory protein TetR; SPTR: Q8TMB8 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, tetR family.
 
   
 0.813
Saut_1318
Secretion protein HlyD family protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: sun:SUN_0277 efflux system, membrane fusion protein; PFAM: secretion protein HlyD family protein; SPTR: A3L232 Putative uncharacterized protein; PFAM: HlyD family secretion protein.
     
 0.722
Saut_1315
ABC-2 type transporter; InterPro IPR013525:IPR000412; KEGG: sun:SUN_0281 multidrug ABC transporter, permease; PFAM: ABC-2 type transporter; SPTR: A3LIP8 Putative uncharacterized protein; PFAM: ABC-2 type transporter.
       0.718
Saut_1316
ABC-2 type transporter; InterPro IPR013525:IPR000412; KEGG: sun:SUN_0280 multidrug ABC transporter; PFAM: ABC-2 type transporter; SPTR: P37624 Uncharacterized ABC transporter ATP-binding protein yhiH; PFAM: ABC-2 type transporter.
  
    0.718
Saut_1317
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593:IPR017871; KEGG: sun:SUN_0279 multidrug ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: P37624 Uncharacterized ABC transporter ATP-binding protein yhiH; PFAM: ABC transporter.
       0.718
Saut_1332
Secretion protein HlyD family protein; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tdn:Suden_0878 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: A3J1K8 Secretion protein HlyD; PFAM: HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.718
Saut_1327
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: sun:SUN_1402 efflux system, membrane fusion protein; PFAM: secretion protein HlyD family protein; SPTR: A2UVV8 Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.638
Saut_1328
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sun:SUN_1403 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A3I2I1 Outer membrane efflux protein, putative; PFAM: Outer membrane efflux protein.
 
 
 0.581
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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