STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_1339KEGG: sun:SUN_0074 hypothetical protein. (130 aa)    
Predicted Functional Partners:
Saut_0118
KEGG: tdn:Suden_0164 hypothetical protein; SPTR: A3XTH6 Putative cyclopropane fatty acid synthase; PFAM: Methyltransferase domain.
  
     0.755
Saut_1598
KEGG: sun:SUN_0045 hypothetical protein.
  
     0.682
Saut_1728
KEGG: tdn:Suden_1457 hypothetical protein; SPTR: A3ET71 Putative uncharacterized protein.
  
     0.578
Saut_1336
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462:IPR004570; KEGG: tdn:Suden_1233 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: A3ICB1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase); TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-ph [...]
       0.572
Saut_1337
Membrane-associated zinc metalloprotease; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915:IPR001478:IPR004387; KEGG: tdn:Suden_1234 peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; SPTR: Q9PNM6 Putative zinc metalloprotease Cj1068; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.
       0.572
Saut_1338
Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.572
Saut_1736
KEGG: tdn:Suden_1675 hypothetical protein; SPTR: A3ET71 Putative uncharacterized protein; PFAM: Cache domain.
  
     0.525
Saut_2099
InterPro IPR014880; KEGG: abu:Abu_0569 sulfur oxidation protein SoxYZ, sulfur compound chelating protein; PFAM: Sulphur oxidation protein SoxZ; SPTR: A3RTX7 Putative uncharacterized protein; PFAM: Sulphur oxidation protein SoxZ.
  
     0.497
Saut_0423
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: tdn:Suden_1782 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: A0MZB4 Gp24; PFAM: ATPase family associated with various cellular activities (AAA).
  
     0.491
Saut_1898
DsrE family protein; COGs: COG1553 conserved hypothetical protein involved in intracellular sulfur reduction; InterPro IPR003787; KEGG: nam:NAMH_1288 hypothetical protein; PFAM: DsrE family protein; SPTR: P94948 Uncharacterized protein MK0008; PFAM: DsrE/DsrF-like family.
  
     0.474
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.