STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_1728KEGG: tdn:Suden_1457 hypothetical protein; SPTR: A3ET71 Putative uncharacterized protein. (287 aa)    
Predicted Functional Partners:
Saut_0988
KEGG: tdn:Suden_0257 hypothetical protein.
  
     0.679
Saut_1339
KEGG: sun:SUN_0074 hypothetical protein.
  
     0.578
Saut_0457
KEGG: nis:NIS_1573 hypothetical protein; SPTR: B4YQD3 Sporozoite asparagine-rich protein 1.
  
     0.560
Saut_1729
TPR repeat-containing protein; InterPro IPR001440:IPR019734:IPR013026; KEGG: tdn:Suden_1668 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Q23WR6 SLEI family protein.
       0.511
Saut_0934
COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: tcx:Tcr_2023 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like; PFAM: NMT1/THI5 like.
  
     0.505
Saut_0618
KEGG: tdn:Suden_0257 hypothetical protein.
  
     0.498
Saut_0620
InterPro IPR010870; KEGG: tcx:Tcr_2159 phosphate-selective porin O and P; PFAM: phosphate-selective porin O and P; PFAM: Phosphate-selective porin O and P.
  
     0.472
Saut_1968
PDP protein; KEGG: tdn:Suden_0077 PDP protein; SPTR: A0NT30 Putative uncharacterized protein; PFAM: MgtE intracellular N domain.
  
     0.470
Saut_0940
Protein of unknown function DUF342; InterPro IPR005646; KEGG: tdn:Suden_1210 hypothetical protein; PFAM: protein of unknown function DUF342; SPTR: A3IDS1 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF342).
  
     0.446
Saut_0203
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: tdn:Suden_0208 response regulator receiver domain-containing protein; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; SPTR: O07014 Phosphoserine phosphatase rsbP; PFAM: Stage II sporulation protein E (SpoIIE).
  
     0.438
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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