STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_1773KEGG: tdn:Suden_0435 hypothetical protein. (152 aa)    
Predicted Functional Partners:
Saut_1774
Conserved hypothetical protein; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; KEGG: abu:Abu_0265 hypothetical protein; SPTR: P44118 Uncharacterized protein HI1169; PFAM: Aminotransferase class IV.
       0.802
Saut_1775
COGs: COG0031 Cysteine synthase; InterPro IPR001926:IPR001216:IPR005856:IPR005859; KEGG: tdn:Suden_0433 cysteine synthase K/M/A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: A1HQ97 Cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.781
Saut_1776
COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR000106:IPR017867; KEGG: abu:Abu_0594 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: A3JFY1 Phosphotyrosine protein phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
       0.773
Saut_1777
Hypothetical protein.
       0.557
Saut_0717
COGs: COG1868 Flagellar motor switch protein; InterPro IPR001689:IPR001543; KEGG: tdn:Suden_0707 flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; SPTR: P74927 Flagellar motor switch protein fliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM.
    
   0.410
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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