STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Saut_1976KEGG: tdn:Suden_1313 hypothetical protein; PFAM: NosL. (149 aa)    
Predicted Functional Partners:
Saut_1980
KEGG: tdn:Suden_1307 putative ABC-2 type transport system permease protein; SPTR: P19845 Membrane protein nosY.
 
 
 0.918
Saut_1986
Periplasmic copper-binding protein; COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR007742:IPR006626; KEGG: tdn:Suden_1300 periplasmic copper-binding; PFAM: periplasmic copper-binding; SPTR: A0NZJ8 Nitrous oxide maturation protein NosD; PFAM: Periplasmic copper-binding protein (NosD).
 
 
 0.886
Saut_1977
COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006626; KEGG: sun:SUN_0158 nitrous oxidase accessory protein NosD; SPTR: A0NZJ8 Nitrous oxide maturation protein NosD; PFAM: Periplasmic copper-binding protein (NosD).
 
 
 0.875
Saut_1988
COGs: COG4263 Nitrous oxide reductase; InterPro IPR002429:IPR009056; KEGG: tdn:Suden_1298 nitrous-oxide reductase; PFAM: cytochrome c oxidase subunit II; PRIAM: Nitrous-oxide reductase; SPTR: A3MXH7 Nitrous-oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c.
 
  
 0.855
Saut_1987
KEGG: tdn:Suden_1299 hypothetical protein; SPTR: A3MXH9 Putative uncharacterized protein.
 
     0.801
Saut_1981
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: tdn:Suden_1305 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q4J877 ABC transporter, ATP binding protein; PFAM: ABC transporter.
 
 
 0.799
Saut_1984
Conserved hypothetical protein; InterPro IPR009056; KEGG: tdn:Suden_1302 hypothetical protein.
 
     0.750
Saut_1982
Ferredoxin-type protein, NapH/MauN family; COGs: COG0348 Polyferredoxin; InterPro IPR001450:IPR011886; KEGG: tdn:Suden_1304 NapH/MauN family ferredoxin-type protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A0EJJ5 Ferredoxin-type protein; TIGRFAM: ferredoxin-type protein, NapH/MauN family; TIGRFAM: ferredoxin-type protein, NapH/MauN family.
 
  
 0.741
Saut_1985
InterPro IPR001450:IPR017900:IPR006311; KEGG: tdn:Suden_1301 4Fe-4S ferredoxin, iron-sulfur binding; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q51659 Methylamine utilization ferredoxin-type protein mauM; TIGRFAM: MauM/NapG family ferredoxin-type protein.
 
  
 0.741
Saut_1612
KEGG: tdn:Suden_0502 hypothetical protein; PFAM: NosL.
  
     0.706
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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