STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
Coexpression
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[Homology]
Score
Saut_2023Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: tdn:Suden_2073 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: A0Z0H2 Nucleoside-diphosphate-sugar pyrophosphorylase; PFAM: Nucleotidyl transferase. (218 aa)    
Predicted Functional Partners:
Saut_2022
COGs: COG3178 phosphotransferase related to Ser/Thr protein kinase; InterPro IPR002575; KEGG: tdn:Suden_2072 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: A3WLC5 Predicted phosphotransferase related to Ser/Thr protein kinase; PFAM: Phosphotransferase enzyme family.
 
 
 0.991
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
    
  0.900
Saut_2024
COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: tdn:Suden_2074 membrane-bound lytic murein transglycosylase B-like; SPTR: A0NNL6 Lytic murein transglycosylase.
 
     0.805
Saut_1450
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
     
  0.800
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
  0.800
Saut_0258
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.657
Saut_0257
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.654
anmK
Protein of unknown function UPF0075; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
     0.645
Saut_0260
dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR013120:IPR002225:IPR003869:IPR001509:IPR 002198:IPR005888; KEGG: abu:Abu_1816 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; SPTR: A3J370 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glu [...]
  
  
 0.594
Saut_2018
Glycoside hydrolase family 3 domain protein; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR002502:IPR001764; KEGG: tdn:Suden_2069 beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; SPTR: A1ZDA7 Glycosyl hydrolase, family 3; PFAM: N-acetylmuramoyl-L-alanine amidase; Glycosyl hydrolase family 3 N terminal domain.
       0.590
Your Current Organism:
Sulfurimonas autotrophica
NCBI taxonomy Id: 563040
Other names: S. autotrophica DSM 16294, Sulfurimonas autotrophica DSM 16294, Sulfurimonas autotrophica OK10, Sulfurimonas autotrophica str. DSM 16294, Sulfurimonas autotrophica strain DSM 16294
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