STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL29963.1Hypothetical protein. (1769 aa)    
Predicted Functional Partners:
SDN08556.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.758
SDM01255.1
FlgD Ig-like domain-containing protein.
  
     0.757
SDM01377.1
Component of the Tol biopolymer transport system.
  
    0.746
SDL87596.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
     0.723
SDM57353.1
Hypothetical protein.
  
     0.692
SDM69686.1
Helix-hairpin-helix motif-containing protein.
  
     0.685
SDN00415.1
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.668
SDM59955.1
Hypothetical protein.
  
     0.599
SDL84414.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.597
SDM98116.1
Hypothetical protein.
  
    0.583
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.