STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL30782.1Predicted neuraminidase (sialidase). (370 aa)    
Predicted Functional Partners:
SDL30967.1
Tat (twin-arginine translocation) pathway signal sequence.
     0.986
SDL30625.1
Hypothetical protein.
 
    0.908
SDL40786.1
alpha-L-rhamnosidase.
 
 
  0.900
SDL30686.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
     0.896
SDL30596.1
Hypothetical protein.
     0.894
SDM23277.1
alpha-L-rhamnosidase.
 
 
  0.888
SDL30656.1
Putative collagen-binding domain of a collagenase.
 
    0.872
SDL30999.1
Alpha-L-rhamnosidase N-terminal domain-containing protein.
      0.844
SDL30903.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
     0.830
SDL30934.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.819
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.