STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL46748.1Hypothetical protein. (507 aa)    
Predicted Functional Partners:
SDL88169.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.791
SDL70600.1
Protein of unknown function.
    
   0.667
SDM91502.1
Protein of unknown function.
    
   0.590
SDL77820.1
Beta-glucosidase.
     
 0.571
SDM58872.1
Beta-glucosidase.
     
 0.571
SDL55331.1
Thiol-disulfide isomerase or thioredoxin.
  
     0.552
SDL46776.1
Hypothetical protein.
 
    
0.544
SDM07502.1
Por secretion system C-terminal sorting domain-containing protein.
  
    0.483
SDL74220.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.462
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.460
Your Current Organism:
Siphonobacter aquaeclarae
NCBI taxonomy Id: 563176
Other names: DSM 21668, Flexibacteraceae bacterium P2, NCAIM B 02328, S. aquaeclarae, Siphonobacter aquaeclarae Tancsics et al. 2010, strain P2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.